Publications

2016

Papers in international journals

  1. B. Bejnordi, M. Balkenhol, G. Litjens, R. Holland, P. Bult, N. Karssemeijer and J. van der Laak, "Automated Detection of DCIS in Whole-Slide H&E Stained Breast Histopathology Images", IEEE Transactions on Medical Imaging, 2016;35:2141-2150. Abstract/PDF DOI PMID Url Cited by ~55
  2. B. Bejnordi, G. Litjens, N. Timofeeva, I. Otte-Holler, A. Homeyer, N. Karssemeijer and J. van der Laak, "Stain specific standardization of whole-slide histopathological images", IEEE Transactions on Medical Imaging, 2016;35:404-415. Abstract/PDF DOI PMID Url Cited by ~128
  3. R. Remark, T. Merghoub, N. Grabe, G. Litjens, D. Damotte, J. Wolchok, M. Merad and S. Gnjatic, "In-depth tissue profiling using multiplexed immunohistochemical consecutive staining on single slide", Science Immunology, 2016;1:aaf6925-aaf6925. Abstract/PDF DOI PMID Url Cited by ~63
  4. T. Kobus, J. van der Laak, M. Maas, T. Hambrock, C. Bruggink, C. Hulsbergen-van de Kaa, T. Scheenen and A. Heerschap, "Contribution of Histopathologic Tissue Composition to Quantitative MR Spectroscopy and Diffusion-weighted Imaging of the Prostate", Radiology, 2016;278:801-811. Abstract/PDF DOI PMID Url Cited by ~26
  5. F. Ciompi, S. Balocco, J. Rigla, X. Carrillo, J. Mauri and P. Radeva, "Computer-aided detection of intracoronary stent in intravascular ultrasound sequences", Medical Physics, 2016;43(10):5616. Abstract/PDF DOI PMID Cited by ~7
  6. O. Debats, M. Meijs, G. Litjens and H. Huisman, "Automated multistructure atlas-assisted detection of lymph nodes using pelvic MR lymphography in prostate cancer patients", Medical Physics, 2016;43:3132. Abstract/PDF DOI PMID Url Cited by ~2
  7. J. Charbonnier, M. Brink, F. Ciompi, E. Scholten, C. Schaefer-Prokop and E. van Rikxoort, "Automatic Pulmonary Artery-Vein Separation and Classification in Computed Tomography Using Tree Partitioning and Peripheral Vessel Matching", IEEE Transactions on Medical Imaging, 2016:882-892. Abstract/PDF DOI PMID Url Cited by ~21
  8. G. Litjens, R. Elliott, N. Shih, M. Feldman, T. Kobus, C. Hulsbergen-van de Kaa, J. Barentsz, H. Huisman and A. Madabhushi, "Computer-extracted Features Can Distinguish Noncancerous Confounding Disease from Prostatic Adenocarcinoma at Multiparametric MR Imaging.", Radiology, 2016;278:135-145. Abstract DOI PMID
  9. A. Setio, F. Ciompi, G. Litjens, P. Gerke, C. Jacobs, S. van Riel, M. Wille, M. Naqibullah, C. Sánchez and B. van Ginneken, "Pulmonary nodule detection in CT images: false positive reduction using multi-view convolutional networks", IEEE Transactions on Medical Imaging, 2016;35:1160-1169. Abstract/PDF DOI PMID Cited by ~605
  10. O. Debats, A. Fortuin, H. Meijer, T. Hambrock, G. Litjens, J. Barentsz and H. Huisman, "Intranodal signal suppression in pelvic MR lymphography of prostate cancer patients: a quantitative comparison of ferumoxtran-10 and ferumoxytol", PeerJ, 2016;4:e2471. Abstract/PDF DOI PMID Cited by ~7
  11. G. Litjens, C. Sánchez, N. Timofeeva, M. Hermsen, I. Nagtegaal, I. Kovacs, C. Hulsbergen-van de Kaa, P. Bult, B. van Ginneken and J. van der Laak, "Deep learning as a tool for increased accuracy and efficiency of histopathological diagnosis", Nature Scientific Reports, 2016;6:26286. Abstract/PDF DOI PMID Url Cited by ~490

Papers in conference proceedings

  1. T. Mertzanidou, J. Hipwell, S. Reis, B. Bejnordi, M. Hermsen, M. Dalmis, S. Vreemann, B. Platel, J. van der Laak, N. Karssemeijer, R. Mann, P. Bult and D. Hawkes, "Whole Mastectomy Volume Reconstruction from 2D Radiographs and Its Mapping to Histology", Breast Imaging, 2016;9699:367-374. Abstract/PDF DOI Cited by ~3
  2. G. Litjens, K. Safferling and N. Grabe, "Automated robust registration of grossly misregistered whole-slide images with varying stains", Medical Imaging, 2016;9791:979103. Abstract/PDF DOI
  3. N. Lessmann, I. Iš__strip__gum, A. Setio, B. de Vos, F. Ciompi, P. de Jong, M. Oudkerk, W. Mali, M. Viergever and B. van Ginneken, "Deep convolutional neural networks for automatic coronary calcium scoring in a screening study with low-dose chest CT", Medical Imaging, 2016;9785:978511-1 - 978511-6. Abstract/PDF DOI Cited by ~25

Abstracts

  1. M. Hermsen and J. van der Laak, "Highly multiplexed immunofluorescence using spectral imaging", DPA's Pathology Visions Conference 2016, San Diego, CA, US, 2016. Abstract/PDF
  2. F. Ciompi, K. Chung, A. Setio, S. van Riel, E. Scholten, P. Gerke, C. Jacobs, U. Pastorino, A. Marchiano, M. Wille, M. Prokop and B. van Ginneken, "Pulmonary nodule type classification with convolutional networks", Medical Image Computing and Computer-Assisted Intervention, 2016. Abstract/PDF