Publications of Oscar Geessink

Papers in international journals

  1. M. Smit, F. Ciompi, J. Bokhorst, G. van Pelt, O. Geessink, H. Putter, R. Tollenaar, J. van Krieken, W. Mesker and J. van der Laak, "Deep learning based tumor–stroma ratio scoring in colon cancer correlates with microscopic assessment", Journal of Pathology Informatics, 2023.
    Abstract DOI
  2. Z. Swiderska-Chadaj, H. Pinckaers, M. van Rijthoven, M. Balkenhol, M. Melnikova, O. Geessink, Q. Manson, M. Sherman, A. Polonia, J. Parry, M. Abubakar, G. Litjens, J. van der Laak and F. Ciompi, "Learning to detect lymphocytes in immunohistochemistry with deep learning", Medical Image Analysis, 2019;58:101547.
    Abstract DOI PMID Cited by ~9
  3. O. Geessink, A. Baidoshvili, J. Klaase, B. Ehteshami Bejnordi, G. Litjens, G. van Pelt, W. Mesker, I. Nagtegaal, F. Ciompi and J. van der Laak, "Computer aided quantification of intratumoral stroma yields an independent prognosticator in rectal cancer", Cellular Oncology, 2019:1-11.
    Abstract DOI PMID Cited by ~8 Download
  4. P. Bándi, O. Geessink, Q. Manson, M. van Dijk, M. Balkenhol, M. Hermsen, B. Bejnordi, B. Lee, K. Paeng, A. Zhong, Q. Li, F. Zanjani, S. Zinger, K. Fukuta, D. Komura, V. Ovtcharov, S. Cheng, S. Zeng, J. Thagaard, A. Dahl, H. Lin, H. Chen, L. Jacobsson, M. Hedlund, M. Cetin, E. Halici, H. Jackson, R. Chen, F. Both, J. Franke, H. Kusters-Vandevelde, W. Vreuls, P. Bult, B. van Ginneken, J. van der Laak and G. Litjens, "From detection of individual metastases to classification of lymph node status at the patient level: the CAMELYON17 challenge", IEEE Transactions on Medical Imaging, 2018;38(2):550-560.
    Abstract DOI PMID Cited by ~54
  5. G. Litjens, P. Bandi, B. Ehteshami Bejnordi, O. Geessink, M. Balkenhol, P. Bult, A. Halilovic, M. Hermsen, R. van de Loo, R. Vogels, Q. Manson, N. Stathonikos, A. Baidoshvili, P. van Diest, C. Wauters, M. van Dijk and J. van der Laak, "1399 H&E-stained sentinel lymph node sections of breast cancer patients: the CAMELYON dataset", GigaScience, 2018;7(6):1-8.
    Abstract DOI PMID Cited by ~48
  6. B. Ehteshami Bejnordi, M. Veta, P. van Diest, B. van Ginneken, N. Karssemeijer, G. Litjens, J. van der Laak, T. Consortium, M. Hermsen, Q. Manson, M. Balkenhol, O. Geessink, N. Stathonikos, M. van Dijk, P. Bult, F. Beca, A. Beck, D. Wang, A. Khosla, R. Gargeya, H. Irshad, A. Zhong, Q. Dou, Q. Li, H. Chen, H. Lin, P. Heng, C. Haß, E. Bruni, Q. Wong, U. Halici, M. Öner, R. Cetin-Atalay, M. Berseth, V. Khvatkov, A. Vylegzhanin, O. Kraus, M. Shaban, N. Rajpoot, R. Awan, K. Sirinukunwattana, T. Qaiser, Y. Tsang, D. Tellez, J. Annuscheit, P. Hufnagl, M. Valkonen, K. Kartasalo, L. Latonen, P. Ruusuvuori, K. Liimatainen, S. Albarqouni, B. Mungal, A. George, S. Demirci, N. Navab, S. Watanabe, S. Seno, Y. Takenaka, H. Matsuda, H. Ahmady Phoulady, V. Kovalev, A. Kalinovsky, V. Liauchuk, G. Bueno, M. Fernandez-Carrobles, I. Serrano, O. Deniz, D. Racoceanu and R. Venâncio, "Diagnostic Assessment of Deep Learning Algorithms for Detection of Lymph Node Metastases in Women With Breast Cancer", Journal of the American Medical Association, 2017;318(22):2199-2210.
    Abstract DOI PMID Cited by ~791

Papers in conference proceedings

  1. Z. Swiderska-Chadaj, H. Pinckaers, M. van Rijthoven, M. Balkenhol, M. Melnikova, O. Geessink, Q. Manson, G. Litjens, J. van der Laak and F. Ciompi, "Convolutional Neural Networks for Lymphocyte detection in Immunohistochemically Stained Whole-Slide Images", Medical Imaging with Deep Learning, 2018.
    Abstract Url Cited by ~5
  2. F. Ciompi, O. Geessink, B. Bejnordi, G. de Souza, A. Baidoshvili, G. Litjens, B. van Ginneken, I. Nagtegaal and J. van der Laak, "The importance of stain normalization in colorectal tissue classification with convolutional networks", IEEE International Symposium on Biomedical Imaging, 2017:160-163.
    Abstract DOI arXiv Cited by ~75